IL_6OGI_196
3D structure
- PDB id
- 6OGI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S termination complex with RF2 bound to the UAG codon. Rotated ribosome conformation (Structure V)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- GGAAGUUUU*GAAUGUGCCUUCGGGAACC
- Length
- 28 nucleotides
- Bulged bases
- 6OGI|1|3|U|1025, 6OGI|1|3|U|1030, 6OGI|1|3|C|1031, 6OGI|1|3|G|1032
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6OGI|1|3|G|1002
6OGI|1|3|G|1003
6OGI|1|3|A|1004
6OGI|1|3|A|1005
6OGI|1|3|G|1006
6OGI|1|3|U|1007
6OGI|1|3|U|1008
6OGI|1|3|U|1009
6OGI|1|3|U|1010
*
6OGI|1|3|G|1020
6OGI|1|3|A|1021
6OGI|1|3|A|1022
6OGI|1|3|U|1023
6OGI|1|3|G|1024
6OGI|1|3|U|1025
6OGI|1|3|G|1026
6OGI|1|3|C|1027
6OGI|1|3|C|1028
6OGI|1|3|U|1029
6OGI|1|3|U|1030
6OGI|1|3|C|1031
6OGI|1|3|G|1032
6OGI|1|3|G|1033
6OGI|1|3|G|1034
6OGI|1|3|A|1035
6OGI|1|3|A|1036
6OGI|1|3|C|1037
6OGI|1|3|C|1038
Current chains
- Chain 3
- 16S ribosomal RNA
Nearby chains
- Chain S
- 30S ribosomal protein S14
Coloring options: