IL_6OGI_197

3D structure

PDB id

6OGI (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S termination complex with RF2 bound to the UAG codon. Rotated ribosome conformation (Structure V)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GAGAAG*CGGACCUC

Length

14 nucleotides

Bulged bases

6OGI|1|3|A|1257, 6OGI|1|3|A|1280, 6OGI|1|3|C|1281

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OGI|1|3|G|1253
6OGI|1|3|A|1254
6OGI|1|3|G|1255
6OGI|1|3|A|1256
6OGI|1|3|A|1257
6OGI|1|3|G|1258
*
6OGI|1|3|C|1277
6OGI|1|3|G|1278
6OGI|1|3|G|1279
6OGI|1|3|A|1280
6OGI|1|3|C|1281
6OGI|1|3|C|1282
6OGI|1|3|U|1283
6OGI|1|3|C|1284

Current chains

Chain 3

16S ribosomal RNA

Nearby chains

Chain H

30S ribosomal protein S3

Chain O

30S ribosomal protein S10

Chain S

30S ribosomal protein S14