IL_6OGI_199

3D structure

PDB id

6OGI (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S termination complex with RF2 bound to the UAG codon. Rotated ribosome conformation (Structure V)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CGUCACA*UGAAGUCG

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OGI|1|3|C|1404
6OGI|1|3|G|1405
6OGI|1|3|U|1406
6OGI|1|3|C|1407
6OGI|1|3|A|1408
6OGI|1|3|C|1409
6OGI|1|3|A|1410
*
6OGI|1|3|U|1490
6OGI|1|3|G|1491
6OGI|1|3|A|1492
6OGI|1|3|A|1493
6OGI|1|3|G|1494
6OGI|1|3|U|1495
6OGI|1|3|C|1496
6OGI|1|3|G|1497

Current chains

Chain 3

16S ribosomal RNA

Nearby chains

Chain 4

mRNA

Chain Q

30S ribosomal protein S12