IL_6OGI_215
3D structure
- PDB id
- 6OGI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S termination complex with RF2 bound to the UAG codon. Rotated ribosome conformation (Structure V)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- GUUUAAUUCGAUGCAACGCGAAGAACCUUAC*GGCUAC
- Length
- 37 nucleotides
- Bulged bases
- 6OGI|1|3|G|971, 6OGI|1|3|A|975, 6OGI|1|3|G|976, 6OGI|1|3|A|978
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6OGI|1|3|G|954
6OGI|1|3|U|955
6OGI|1|3|U|956
6OGI|1|3|U|957
6OGI|1|3|A|958
6OGI|1|3|A|959
6OGI|1|3|U|960
6OGI|1|3|U|961
6OGI|1|3|C|962
6OGI|1|3|G|963
6OGI|1|3|A|964
6OGI|1|3|U|965
6OGI|1|3|G|966
6OGI|1|3|C|967
6OGI|1|3|A|968
6OGI|1|3|A|969
6OGI|1|3|C|970
6OGI|1|3|G|971
6OGI|1|3|C|972
6OGI|1|3|G|973
6OGI|1|3|A|974
6OGI|1|3|A|975
6OGI|1|3|G|976
6OGI|1|3|A|977
6OGI|1|3|A|978
6OGI|1|3|C|979
6OGI|1|3|C|980
6OGI|1|3|U|981
6OGI|1|3|U|982
6OGI|1|3|A|983
6OGI|1|3|C|984
*
6OGI|1|3|G|1221
6OGI|1|3|G|1222
6OGI|1|3|C|1223
6OGI|1|3|U|1224
6OGI|1|3|A|1225
6OGI|1|3|C|1226
Current chains
- Chain 3
- 16S ribosomal RNA
Nearby chains
- Chain 5
- Transfer RNA; tRNA
- Chain N
- 30S ribosomal protein S9
- Chain O
- 30S ribosomal protein S10
- Chain R
- 30S ribosomal protein S13
- Chain S
- 30S ribosomal protein S14
- Chain X
- 30S ribosomal protein S19
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