IL_6OIG_017
3D structure
- PDB id
- 6OIG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Subunit joining exposes nascent pre-40S rRNA for processing and quality control
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- CAGACAUGGUGUUUUGUAUUUCACUGG*CAUAAUG
- Length
- 34 nucleotides
- Bulged bases
- 6OIG|1|5|G|445, 6OIG|1|5|A|491
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6OIG|1|5|C|435
6OIG|1|5|A|436
6OIG|1|5|G|437
6OIG|1|5|A|438
6OIG|1|5|C|439
6OIG|1|5|A|440
6OIG|1|5|U|441
6OIG|1|5|G|442
6OIG|1|5|G|443
6OIG|1|5|U|444
6OIG|1|5|G|445
6OIG|1|5|U|446
6OIG|1|5|U|447
6OIG|1|5|U|448
6OIG|1|5|U|449
6OIG|1|5|G|450
6OIG|1|5|U|451
6OIG|1|5|A|486
6OIG|1|5|U|487
6OIG|1|5|U|488
6OIG|1|5|U|489
6OIG|1|5|C|490
6OIG|1|5|A|491
6OIG|1|5|C|492
6OIG|1|5|U|493
6OIG|1|5|G|494
6OIG|1|5|G|495
*
6OIG|1|5|C|618
6OIG|1|5|A|619
6OIG|1|5|U|620
6OIG|1|5|A|621
6OIG|1|5|A|622
6OIG|1|5|U|623
6OIG|1|5|G|624
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain E
- 60S ribosomal protein L6-A
- Chain P
- 60S ribosomal protein L17-A
- Chain e
- 60S ribosomal protein L32
- Chain f
- 60S ribosomal protein L33-A
Coloring options: