IL_6OIG_020
3D structure
- PDB id
- 6OIG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Subunit joining exposes nascent pre-40S rRNA for processing and quality control
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GAAUGUAGC*GUAUUAUAGC
- Length
- 19 nucleotides
- Bulged bases
- 6OIG|1|5|U|534, 6OIG|1|5|U|558
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6OIG|1|5|G|531
6OIG|1|5|A|532
6OIG|1|5|A|533
6OIG|1|5|U|534
6OIG|1|5|G|535
6OIG|1|5|U|536
6OIG|1|5|A|537
6OIG|1|5|G|538
6OIG|1|5|C|539
*
6OIG|1|5|G|552
6OIG|1|5|U|553
6OIG|1|5|A|554
6OIG|1|5|U|555
6OIG|1|5|U|556
6OIG|1|5|A|557
6OIG|1|5|U|558
6OIG|1|5|A|559
6OIG|1|5|G|560
6OIG|1|5|C|561
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain M
- 60S ribosomal protein L14-A
- Chain S
- 60S ribosomal protein L20-A
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