IL_6OIG_143
3D structure
- PDB id
- 6OIG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Subunit joining exposes nascent pre-40S rRNA for processing and quality control
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GACCUC*GAGCGUC
- Length
- 13 nucleotides
- Bulged bases
- 6OIG|1|8|C|151
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6OIG|1|5|G|5
6OIG|1|5|A|6
6OIG|1|5|C|7
6OIG|1|5|C|8
6OIG|1|5|U|9
6OIG|1|5|C|10
*
6OIG|1|8|G|148
6OIG|1|8|A|149
6OIG|1|8|G|150
6OIG|1|8|C|151
6OIG|1|8|G|152
6OIG|1|8|U|153
6OIG|1|8|C|154
Current chains
- Chain 5
- 25S ribosomal RNA
- Chain 8
- 5.8S ribosomal RNA
Nearby chains
- Chain G
- 60S ribosomal protein L8-A
- Chain N
- 60S ribosomal protein L15-A
- Chain X
- 60S ribosomal protein L25
Coloring options: