IL_6OIG_152

3D structure

PDB id

6OIG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Subunit joining exposes nascent pre-40S rRNA for processing and quality control

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GGAUU*AGUUUUC

Length

12 nucleotides

Bulged bases

6OIG|1|5|U|1819, 6OIG|1|5|U|1821

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OIG|1|5|G|1623
6OIG|1|5|G|1624
6OIG|1|5|A|1625
6OIG|1|5|U|1626
6OIG|1|5|U|1627
*
6OIG|1|5|A|1816
6OIG|1|5|G|1817
6OIG|1|5|U|1818
6OIG|1|5|U|1819
6OIG|1|5|U|1820
6OIG|1|5|U|1821
6OIG|1|5|C|1822

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain Z

60S ribosomal protein L27-A

Chain g

60S ribosomal protein L34-A