IL_6OIG_153

3D structure

PDB id

6OIG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Subunit joining exposes nascent pre-40S rRNA for processing and quality control

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

UGAAUG*CAGGAA

Length

12 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OIG|1|5|U|1645
6OIG|1|5|G|1646
6OIG|1|5|A|1647
6OIG|1|5|A|1648
6OIG|1|5|U|1649
6OIG|1|5|G|1650
*
6OIG|1|5|C|1805
6OIG|1|5|A|1806
6OIG|1|5|G|1807
6OIG|1|5|G|1808
6OIG|1|5|A|1809
6OIG|1|5|A|1810

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain A

60S ribosomal protein L2-A

Chain Z

60S ribosomal protein L27-A

Chain g

60S ribosomal protein L34-A