IL_6OIG_167

3D structure

PDB id

6OIG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Subunit joining exposes nascent pre-40S rRNA for processing and quality control

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

UUGUG*UUUUUG

Length

11 nucleotides

Bulged bases

6OIG|1|5|U|2860

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OIG|1|5|U|2826
6OIG|1|5|U|2827
6OIG|1|5|G|2828
6OIG|1|5|U|2829
6OIG|1|5|G|2830
*
6OIG|1|5|U|2858
6OIG|1|5|U|2859
6OIG|1|5|U|2860
6OIG|1|5|U|2861
6OIG|1|5|U|2862
6OIG|1|5|G|2863

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain B

60S ribosomal protein L3

Chain I

60S ribosomal protein L10