IL_6OJ2_134
3D structure
- PDB id
- 6OJ2 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of tRNA^ Ala(GGC) bound to the near-cognate 70S A-site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- ACGA*UCUAU
- Length
- 9 nucleotides
- Bulged bases
- 6OJ2|1|RA|C|2055, 6OJ2|1|RA|C|2612, 6OJ2|1|RA|U|2613, 6OJ2|1|RA|A|2614
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6OJ2_134 not in the Motif Atlas
- Homologous match to IL_7RQB_079
- Geometric discrepancy: 0.1068
- The information below is about IL_7RQB_079
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_01206.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
6OJ2|1|RA|A|2054
6OJ2|1|RA|C|2055
6OJ2|1|RA|G|2056
6OJ2|1|RA|A|2057
*
6OJ2|1|RA|U|2611
6OJ2|1|RA|C|2612
6OJ2|1|RA|U|2613
6OJ2|1|RA|A|2614
6OJ2|1|RA|U|2615
Current chains
- Chain RA
- 23S rRNA
Nearby chains
- Chain R5
- 50S ribosomal protein L32
- Chain RE
- 50S ribosomal protein L3
- Chain RW
- 50S ribosomal protein L22
Coloring options: