IL_6OJ2_334
3D structure
- PDB id
- 6OJ2 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of tRNA^ Ala(GGC) bound to the near-cognate 70S A-site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- UGUAAG*UUGAG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6OJ2_334 not in the Motif Atlas
- Homologous match to IL_7RQB_110
- Geometric discrepancy: 0.1231
- The information below is about IL_7RQB_110
- Detailed Annotation
- tHS double platform
- Broad Annotation
- No text annotation
- Motif group
- IL_83162.5
- Basepair signature
- cWW-tSH-L-tHH-L-cWW
- Number of instances in this motif group
- 7
Unit IDs
6OJ2|1|YA|U|2847
6OJ2|1|YA|G|2848
6OJ2|1|YA|U|2849
6OJ2|1|YA|A|2850
6OJ2|1|YA|A|2851
6OJ2|1|YA|G|2852
*
6OJ2|1|YA|U|2865
6OJ2|1|YA|U|2866
6OJ2|1|YA|G|2867
6OJ2|1|YA|A|2868
6OJ2|1|YA|G|2869
Current chains
- Chain YA
- 23S rRNA
Nearby chains
- Chain YR
- 50S ribosomal protein L17
- Chain YT
- 50S ribosomal protein L19
Coloring options: