IL_6OLE_028

3D structure

PDB id

6OLE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AP and PE tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UGGAUAAC*GCUAAUA(OMC)A

Length

17 nucleotides

Bulged bases

6OLE|1|S2|U|172

QA status

Modified nucleotides: OMC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OLE|1|S2|U|144
6OLE|1|S2|G|145
6OLE|1|S2|G|146
6OLE|1|S2|A|147
6OLE|1|S2|U|148
6OLE|1|S2|A|149
6OLE|1|S2|A|150
6OLE|1|S2|C|151
*
6OLE|1|S2|G|167
6OLE|1|S2|C|168
6OLE|1|S2|U|169
6OLE|1|S2|A|170
6OLE|1|S2|A|171
6OLE|1|S2|U|172
6OLE|1|S2|A|173
6OLE|1|S2|OMC|174
6OLE|1|S2|A|175

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain SG

40S ribosomal protein S6

Chain SY

40S ribosomal protein S24