IL_6OLE_108

3D structure

PDB id

6OLE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AP and PE tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CGAAUCC*GACAUGUGG

Length

16 nucleotides

Bulged bases

6OLE|1|t|G|119, 6OLE|1|t|G|148

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OLE|1|t|C|118
6OLE|1|t|G|119
6OLE|1|t|A|120
6OLE|1|t|A|121
6OLE|1|t|U|122
6OLE|1|t|C|123
6OLE|1|t|C|124
*
6OLE|1|t|G|143
6OLE|1|t|A|144
6OLE|1|t|C|145
6OLE|1|t|A|146
6OLE|1|t|U|147
6OLE|1|t|G|148
6OLE|1|t|U|149
6OLE|1|t|G|150
6OLE|1|t|G|151

Current chains

Chain t

28S ribosomal RNA

Nearby chains

Chain D

5.8S ribosomal RNA; 5.8S rRNA

Chain I

60S ribosomal protein L7a

Chain O

60S ribosomal protein L15

Chain i

60S ribosomal protein L35