IL_6OLE_123

3D structure

PDB id

6OLE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AP and PE tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GGCCG*CCGGCGAC

Length

13 nucleotides

Bulged bases

6OLE|1|t|C|660

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OLE|1|t|G|481
6OLE|1|t|G|482
6OLE|1|t|C|483
6OLE|1|t|C|484
6OLE|1|t|G|485
*
6OLE|1|t|C|656
6OLE|1|t|C|657
6OLE|1|t|G|658
6OLE|1|t|G|659
6OLE|1|t|C|660
6OLE|1|t|G|661
6OLE|1|t|A|662
6OLE|1|t|C|663

Current chains

Chain t

28S ribosomal RNA

Nearby chains

Chain C

60S ribosomal protein L4

Chain r

60S ribosomal protein L28