IL_6OLE_173
3D structure
- PDB id
- 6OLE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AP and PE tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CCG*CG
- Length
- 5 nucleotides
- Bulged bases
- 6OLE|1|t|C|1902
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6OLE_173 not in the Motif Atlas
- Geometric match to IL_3SN2_001
- Geometric discrepancy: 0.3997
- The information below is about IL_3SN2_001
- Detailed Annotation
- Single bulged C
- Broad Annotation
- No text annotation
- Motif group
- IL_05642.2
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 60
Unit IDs
6OLE|1|t|C|1901
6OLE|1|t|C|1902
6OLE|1|t|G|1903
*
6OLE|1|t|C|2043
6OLE|1|t|G|2044
Current chains
- Chain t
- 28S ribosomal RNA
Nearby chains
- Chain H
- 60S ribosomal protein L7
- Chain N
- 60S ribosomal protein L14
- Chain P
- 60S ribosomal protein L13a
- Chain T
- 60S ribosomal protein L18a
- Chain g
- 60S ribosomal protein L35a
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