IL_6OLE_217

3D structure

PDB id

6OLE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AP and PE tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GGCGAGCCC*GGGCUCUC

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OLE|1|t|G|4064
6OLE|1|t|G|4065
6OLE|1|t|C|4066
6OLE|1|t|G|4067
6OLE|1|t|A|4068
6OLE|1|t|G|4069
6OLE|1|t|C|4070
6OLE|1|t|C|4071
6OLE|1|t|C|4072
*
6OLE|1|t|G|4076
6OLE|1|t|G|4077
6OLE|1|t|G|4078
6OLE|1|t|C|4079
6OLE|1|t|U|4080
6OLE|1|t|C|4081
6OLE|1|t|U|4082
6OLE|1|t|C|4083

Current chains

Chain t

28S ribosomal RNA

Nearby chains

Chain A

60S ribosomal protein L8

Chain I

60S ribosomal protein L7a

Chain SB

40S ribosomal protein S3a

Chain h

60S ribosomal protein L34