IL_6OLE_245
3D structure
- PDB id
- 6OLE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AP and PE tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UCCUG*CGUCA
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6OLE_245 not in the Motif Atlas
- Geometric match to IL_8S95_002
- Geometric discrepancy: 0.2928
- The information below is about IL_8S95_002
- Detailed Annotation
- Triple non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_71154.2
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 15
Unit IDs
6OLE|1|t|U|4843
6OLE|1|t|C|4844
6OLE|1|t|C|4845
6OLE|1|t|U|4846
6OLE|1|t|G|4847
*
6OLE|1|t|C|4888
6OLE|1|t|G|4889
6OLE|1|t|U|4890
6OLE|1|t|C|4891
6OLE|1|t|A|4892
Current chains
- Chain t
- 28S ribosomal RNA
Nearby chains
- Chain G
- 60S ribosomal protein L6
- Chain N
- 60S ribosomal protein L14
- Chain P
- 60S ribosomal protein L13a
Coloring options: