IL_6OLE_277

3D structure

PDB id

6OLE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AP and PE tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UUCAACCCG*CCGGGCGCA

Length

18 nucleotides

Bulged bases

6OLE|1|t|G|679

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OLE|1|t|U|461
6OLE|1|t|U|462
6OLE|1|t|C|463
6OLE|1|t|A|464
6OLE|1|t|A|465
6OLE|1|t|C|466
6OLE|1|t|C|467
6OLE|1|t|C|468
6OLE|1|t|G|469
*
6OLE|1|t|C|673
6OLE|1|t|C|674
6OLE|1|t|G|675
6OLE|1|t|G|676
6OLE|1|t|G|677
6OLE|1|t|C|678
6OLE|1|t|G|679
6OLE|1|t|C|680
6OLE|1|t|A|681

Current chains

Chain t

28S ribosomal RNA

Nearby chains

Chain G

60S ribosomal protein L6

Chain r

60S ribosomal protein L28