3D structure

PDB id
6OLE (explore in PDB, NAKB, or RNA 3D Hub)
Description
Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AP and PE tRNAs
Experimental method
ELECTRON MICROSCOPY
Resolution
3.1 Å

Loop

Sequence
CGGUAAA*UUUAAAUG
Length
15 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6OLE|1|t|C|1714
6OLE|1|t|G|1715
6OLE|1|t|G|1716
6OLE|1|t|U|1717
6OLE|1|t|A|1718
6OLE|1|t|A|1719
6OLE|1|t|A|1720
*
6OLE|1|t|U|1772
6OLE|1|t|U|1773
6OLE|1|t|U|1774
6OLE|1|t|A|1775
6OLE|1|t|A|1776
6OLE|1|t|A|1777
6OLE|1|t|U|1778
6OLE|1|t|G|1779

Current chains

Chain t
28S ribosomal RNA

Nearby chains

Chain E
5S ribosomal RNA; 5S rRNA
Chain F
60S ribosomal protein L5
Chain H
60S ribosomal protein L7
Chain K
60S ribosomal protein L10
Chain T
60S ribosomal protein L18a
Chain U
60S ribosomal protein L21

Coloring options:

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