IL_6OLF_026

3D structure

PDB id

6OLF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AA and PE tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

UGGAUAAC*GCUAAUA(OMC)A

Length

17 nucleotides

Bulged bases

6OLF|1|S2|U|172

QA status

Modified nucleotides: OMC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OLF|1|S2|U|144
6OLF|1|S2|G|145
6OLF|1|S2|G|146
6OLF|1|S2|A|147
6OLF|1|S2|U|148
6OLF|1|S2|A|149
6OLF|1|S2|A|150
6OLF|1|S2|C|151
*
6OLF|1|S2|G|167
6OLF|1|S2|C|168
6OLF|1|S2|U|169
6OLF|1|S2|A|170
6OLF|1|S2|A|171
6OLF|1|S2|U|172
6OLF|1|S2|A|173
6OLF|1|S2|OMC|174
6OLF|1|S2|A|175

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain SG

40S ribosomal protein S6

Chain SY

40S ribosomal protein S24

Chain X

60S ribosomal protein L24