IL_6OLF_039

3D structure

PDB id

6OLF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AA and PE tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GUC(E3C)A*UCCGC

Length

10 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: E3C

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OLF|1|S2|G|565
6OLF|1|S2|U|566
6OLF|1|S2|C|567
6OLF|1|S2|E3C|568
6OLF|1|S2|A|569
*
6OLF|1|S2|U|581
6OLF|1|S2|C|582
6OLF|1|S2|C|583
6OLF|1|S2|G|584
6OLF|1|S2|C|585

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain SJ

40S ribosomal protein S9

Chain SY

40S ribosomal protein S24