IL_6OLF_054
3D structure
- PDB id
- 6OLF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AA and PE tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GAC*GUUU
- Length
- 7 nucleotides
- Bulged bases
- 6OLF|1|S2|U|1016
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6OLF_054 not in the Motif Atlas
- Geometric match to IL_6CZR_128
- Geometric discrepancy: 0.2734
- The information below is about IL_6CZR_128
- Detailed Annotation
- Single bulged G, near cWW
- Broad Annotation
- Single bulged G, near cWW
- Motif group
- IL_52767.5
- Basepair signature
- cWW-L-R-cWW
- Number of instances in this motif group
- 28
Unit IDs
6OLF|1|S2|G|925
6OLF|1|S2|A|926
6OLF|1|S2|C|927
*
6OLF|1|S2|G|1014
6OLF|1|S2|U|1015
6OLF|1|S2|U|1016
6OLF|1|S2|U|1017
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain SN
- 40S ribosomal protein S13
- Chain Sb
- 40S ribosomal protein S27
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