IL_6OLF_073

3D structure

PDB id

6OLF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AA and PE tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

ACAGGAUUG*CUCGAUU

Length

16 nucleotides

Bulged bases

6OLF|1|S2|G|1285, 6OLF|1|S2|G|1286

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OLF|1|S2|A|1282
6OLF|1|S2|C|1283
6OLF|1|S2|A|1284
6OLF|1|S2|G|1285
6OLF|1|S2|G|1286
6OLF|1|S2|A|1287
6OLF|1|S2|U|1288
6OLF|1|S2|U|1289
6OLF|1|S2|G|1290
*
6OLF|1|S2|C|1309
6OLF|1|S2|U|1310
6OLF|1|S2|C|1311
6OLF|1|S2|G|1312
6OLF|1|S2|A|1313
6OLF|1|S2|U|1314
6OLF|1|S2|U|1315

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain SK

40S ribosomal protein S10

Chain SM

40S ribosomal protein S12

Chain Sd

40S ribosomal protein S29

Chain Sf

40S ribosomal protein S27a