IL_6OLF_086

3D structure

PDB id

6OLF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AA and PE tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GUGCCUACC*GUAACC

Length

15 nucleotides

Bulged bases

6OLF|1|S2|A|1580, 6OLF|1|S2|C|1581

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OLF|1|S2|G|1550
6OLF|1|S2|U|1551
6OLF|1|S2|G|1552
6OLF|1|S2|C|1553
6OLF|1|S2|C|1554
6OLF|1|S2|U|1555
6OLF|1|S2|A|1556
6OLF|1|S2|C|1557
6OLF|1|S2|C|1558
*
6OLF|1|S2|G|1577
6OLF|1|S2|U|1578
6OLF|1|S2|A|1579
6OLF|1|S2|A|1580
6OLF|1|S2|C|1581
6OLF|1|S2|C|1582

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain SD

40S ribosomal protein S3

Chain SK

40S ribosomal protein S10

Chain SU

40S ribosomal protein S20

Chain Sd

40S ribosomal protein S29