IL_6OLF_169
3D structure
- PDB id
- 6OLF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AA and PE tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- CUCAUCAGACCCCAGAAAA*UGAAAAUGGAUGGCGCUGGAG
- Length
- 40 nucleotides
- Bulged bases
- 6OLF|1|t|U|1911, 6OLF|1|t|C|1916, 6OLF|1|t|A|2022, 6OLF|1|t|U|2025, 6OLF|1|t|G|2036
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6OLF|1|t|C|1907
6OLF|1|t|U|1908
6OLF|1|t|C|1909
6OLF|1|t|A|1910
6OLF|1|t|U|1911
6OLF|1|t|C|1912
6OLF|1|t|A|1913
6OLF|1|t|G|1914
6OLF|1|t|A|1915
6OLF|1|t|C|1916
6OLF|1|t|C|1917
6OLF|1|t|C|1918
6OLF|1|t|C|1919
6OLF|1|t|A|1920
6OLF|1|t|G|1921
6OLF|1|t|A|1922
6OLF|1|t|A|1923
6OLF|1|t|A|1924
6OLF|1|t|A|1925
*
6OLF|1|t|U|2019
6OLF|1|t|G|2020
6OLF|1|t|A|2021
6OLF|1|t|A|2022
6OLF|1|t|A|2023
6OLF|1|t|A|2024
6OLF|1|t|U|2025
6OLF|1|t|G|2026
6OLF|1|t|G|2027
6OLF|1|t|A|2028
6OLF|1|t|U|2029
6OLF|1|t|G|2030
6OLF|1|t|G|2031
6OLF|1|t|C|2032
6OLF|1|t|G|2033
6OLF|1|t|C|2034
6OLF|1|t|U|2035
6OLF|1|t|G|2036
6OLF|1|t|G|2037
6OLF|1|t|A|2038
6OLF|1|t|G|2039
Current chains
- Chain t
- 28S ribosomal RNA
Nearby chains
- Chain B
- 60S ribosomal protein L3
- Chain E
- 5S ribosomal RNA; 5S rRNA
- Chain J
- 60S ribosomal protein L9
- Chain K
- 60S ribosomal protein L10
- Chain N
- 60S ribosomal protein L14
- Chain P
- 60S ribosomal protein L13a
- Chain T
- 60S ribosomal protein L18a
- Chain g
- 60S ribosomal protein L35a
- Chain n
- 60S ribosomal protein L40
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