3D structure

PDB id
6OLF (explore in PDB, NAKB, or RNA 3D Hub)
Description
Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AA and PE tRNAs
Experimental method
ELECTRON MICROSCOPY
Resolution
3.9 Å

Loop

Sequence
GGCGAGCCC*GGGCUCUC
Length
17 nucleotides
Bulged bases
None detected
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6OLF|1|t|G|4064
6OLF|1|t|G|4065
6OLF|1|t|C|4066
6OLF|1|t|G|4067
6OLF|1|t|A|4068
6OLF|1|t|G|4069
6OLF|1|t|C|4070
6OLF|1|t|C|4071
6OLF|1|t|C|4072
*
6OLF|1|t|G|4076
6OLF|1|t|G|4077
6OLF|1|t|G|4078
6OLF|1|t|C|4079
6OLF|1|t|U|4080
6OLF|1|t|C|4081
6OLF|1|t|U|4082
6OLF|1|t|C|4083

Current chains

Chain t
28S ribosomal RNA

Nearby chains

Chain A
60S ribosomal protein L8
Chain I
60S ribosomal protein L7a
Chain SB
40S ribosomal protein S3a
Chain h
60S ribosomal protein L34

Coloring options:

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