IL_6OLF_221
3D structure
- PDB id
- 6OLF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AA and PE tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- CCAAG*CGACG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6OLF_221 not in the Motif Atlas
- Homologous match to IL_8C3A_114
- Geometric discrepancy: 0.1642
- The information below is about IL_8C3A_114
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_65585.1
- Basepair signature
- cWW-L-R-tSH-tHS-cWW
- Number of instances in this motif group
- 13
Unit IDs
6OLF|1|t|C|4374
6OLF|1|t|C|4375
6OLF|1|t|A|4376
6OLF|1|t|A|4377
6OLF|1|t|G|4378
*
6OLF|1|t|C|4388
6OLF|1|t|G|4389
6OLF|1|t|A|4390
6OLF|1|t|C|4391
6OLF|1|t|G|4392
Current chains
- Chain t
- 28S ribosomal RNA
Nearby chains
- Chain K
- 60S ribosomal protein L10
- Chain n
- 60S ribosomal protein L40
- Chain u
- Transfer RNA; tRNA
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