IL_6OLF_226
3D structure
- PDB id
- 6OLF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AA and PE tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- CG*CAG
- Length
- 5 nucleotides
- Bulged bases
- 6OLF|1|t|A|4510
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6OLF_226 not in the Motif Atlas
- Geometric match to IL_7RQB_101
- Geometric discrepancy: 0.168
- The information below is about IL_7RQB_101
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_37497.6
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 118
Unit IDs
6OLF|1|t|C|4499
6OLF|1|t|G|4500
*
6OLF|1|t|C|4509
6OLF|1|t|A|4510
6OLF|1|t|G|4511
Current chains
- Chain t
- 28S ribosomal RNA
Nearby chains
- Chain A
- 60S ribosomal protein L8
- Chain K
- 60S ribosomal protein L10
- Chain u
- Transfer RNA; tRNA
- Chain y
- Cadherin-1
Coloring options: