IL_6OLF_238

3D structure

PDB id

6OLF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AA and PE tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GAAACGGGG*CCCCUCGC

Length

17 nucleotides

Bulged bases

6OLF|1|t|C|4884

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OLF|1|t|G|4849
6OLF|1|t|A|4850
6OLF|1|t|A|4851
6OLF|1|t|A|4852
6OLF|1|t|C|4853
6OLF|1|t|G|4854
6OLF|1|t|G|4855
6OLF|1|t|G|4856
6OLF|1|t|G|4857
*
6OLF|1|t|C|4879
6OLF|1|t|C|4880
6OLF|1|t|C|4881
6OLF|1|t|C|4882
6OLF|1|t|U|4883
6OLF|1|t|C|4884
6OLF|1|t|G|4885
6OLF|1|t|C|4886

Current chains

Chain t

28S ribosomal RNA

Nearby chains

Chain N

60S ribosomal protein L14

Chain P

60S ribosomal protein L13a