IL_6OLF_255
3D structure
- PDB id
- 6OLF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AA and PE tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GGAUG*CGCC
- Length
- 9 nucleotides
- Bulged bases
- 6OLF|1|E|U|84
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6OLF_255 not in the Motif Atlas
- Geometric match to IL_1MFQ_004
- Geometric discrepancy: 0.2571
- The information below is about IL_1MFQ_004
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_85033.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 35
Unit IDs
6OLF|1|E|G|81
6OLF|1|E|G|82
6OLF|1|E|A|83
6OLF|1|E|U|84
6OLF|1|E|G|85
*
6OLF|1|E|C|92
6OLF|1|E|G|93
6OLF|1|E|C|94
6OLF|1|E|C|95
Current chains
- Chain E
- 5S ribosomal RNA
Nearby chains
- Chain H
- 60S ribosomal protein L7
- Chain K
- 60S ribosomal protein L10
- Chain T
- 60S ribosomal protein L18a
- Chain t
- Large subunit ribosomal RNA; LSU rRNA
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