IL_6OLF_263

3D structure

PDB id

6OLF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AA and PE tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GGCCGGGGG*CAAGAAU

Length

16 nucleotides

Bulged bases

6OLF|1|S2|G|933

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OLF|1|S2|G|928
6OLF|1|S2|G|929
6OLF|1|S2|C|930
6OLF|1|S2|C|931
6OLF|1|S2|G|932
6OLF|1|S2|G|933
6OLF|1|S2|G|934
6OLF|1|S2|G|935
6OLF|1|S2|G|936
*
6OLF|1|S2|C|1007
6OLF|1|S2|A|1008
6OLF|1|S2|A|1009
6OLF|1|S2|G|1010
6OLF|1|S2|A|1011
6OLF|1|S2|A|1012
6OLF|1|S2|U|1013

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain SB

40S ribosomal protein S3a

Chain SN

40S ribosomal protein S13

Chain Sa

40S ribosomal protein S26

Chain Sb

40S ribosomal protein S27

Chain d

60S ribosomal protein L30