3D structure

PDB id
6OLF (explore in PDB, NAKB, or RNA 3D Hub)
Description
Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AA and PE tRNAs
Experimental method
ELECTRON MICROSCOPY
Resolution
3.9 Å

Loop

Sequence
CCGGCGCCGCUCGUG*CCGGCGCGCG
Length
25 nucleotides
Bulged bases
6OLF|1|t|U|184
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6OLF|1|t|C|171
6OLF|1|t|C|172
6OLF|1|t|G|173
6OLF|1|t|G|174
6OLF|1|t|C|175
6OLF|1|t|G|176
6OLF|1|t|C|177
6OLF|1|t|C|178
6OLF|1|t|G|179
6OLF|1|t|C|180
6OLF|1|t|U|181
6OLF|1|t|C|182
6OLF|1|t|G|183
6OLF|1|t|U|184
6OLF|1|t|G|185
*
6OLF|1|t|C|248
6OLF|1|t|C|249
6OLF|1|t|G|250
6OLF|1|t|G|251
6OLF|1|t|C|252
6OLF|1|t|G|253
6OLF|1|t|C|254
6OLF|1|t|G|255
6OLF|1|t|C|256
6OLF|1|t|G|257

Current chains

Chain t
28S ribosomal RNA

Nearby chains

Chain M
60S ribosomal protein L13
Chain i
60S ribosomal protein L35
Chain k
60S ribosomal protein L37

Coloring options:

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