Loop IL_6OLF

3D structure

PDB id: 6OLF (explore in PDB, NAKB, or RNA 3D Hub)
Description: Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AA and PE tRNAs
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.9 Å

Loop

Sequence: GGGCCCAAGUCCUUCUGAUCGAGGCCCAGCC*GGACGGUGUGAGGCCGGUAGCGGC
Length: 55 nucleotides
Bulged bases: 6OLF|1|t|C|212, 6OLF|1|t|C|213, 6OLF|1|t|G|241
QA status: Valid loop

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

6OLF|1|t|G|188
6OLF|1|t|G|189
6OLF|1|t|G|190
6OLF|1|t|C|191
6OLF|1|t|C|192
6OLF|1|t|C|193
6OLF|1|t|A|194
6OLF|1|t|A|195
6OLF|1|t|G|196
6OLF|1|t|U|197
6OLF|1|t|C|198
6OLF|1|t|C|199
6OLF|1|t|U|200
6OLF|1|t|U|201
6OLF|1|t|C|202
6OLF|1|t|U|203
6OLF|1|t|G|204
6OLF|1|t|A|205
6OLF|1|t|U|206
6OLF|1|t|C|207
6OLF|1|t|G|208
6OLF|1|t|A|209
6OLF|1|t|G|210
6OLF|1|t|G|211
6OLF|1|t|C|212
6OLF|1|t|C|213
6OLF|1|t|C|214
6OLF|1|t|A|215
6OLF|1|t|G|216
6OLF|1|t|C|217
6OLF|1|t|C|218
*
6OLF|1|t|G|222
6OLF|1|t|G|223
6OLF|1|t|A|224
6OLF|1|t|C|225
6OLF|1|t|G|226
6OLF|1|t|G|227
6OLF|1|t|U|228
6OLF|1|t|G|229
6OLF|1|t|U|230
6OLF|1|t|G|231
6OLF|1|t|A|232
6OLF|1|t|G|233
6OLF|1|t|G|234
6OLF|1|t|C|235
6OLF|1|t|C|236
6OLF|1|t|G|237
6OLF|1|t|G|238
6OLF|1|t|U|239
6OLF|1|t|A|240
6OLF|1|t|G|241
6OLF|1|t|C|242
6OLF|1|t|G|243
6OLF|1|t|G|244
6OLF|1|t|C|245

Current chains

Chain t: 28S ribosomal RNA

Nearby chains

Chain C: 60S ribosomal protein L4
Chain D: 5.8S ribosomal RNA; 5.8S rRNA
Chain Z: 60S ribosomal protein L26
Chain f: 60S ribosomal protein L32
Chain k: 60S ribosomal protein L37

IL_6OLF_279