3D structure

PDB id
6OLF (explore in PDB, NAKB, or RNA 3D Hub)
Description
Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AA and PE tRNAs
Experimental method
ELECTRON MICROSCOPY
Resolution
3.9 Å

Loop

Sequence
CGGAGGA*UUUCCAG
Length
14 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6OLF|1|t|C|454
6OLF|1|t|G|455
6OLF|1|t|G|456
6OLF|1|t|A|457
6OLF|1|t|G|458
6OLF|1|t|G|459
6OLF|1|t|A|460
*
6OLF|1|t|U|682
6OLF|1|t|U|683
6OLF|1|t|U|684
6OLF|1|t|C|685
6OLF|1|t|C|686
6OLF|1|t|A|687
6OLF|1|t|G|688

Current chains

Chain t
28S ribosomal RNA

Nearby chains

Chain G
60S ribosomal protein L6
Chain r
60S ribosomal protein L28

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.3602 s