IL_6OLF_296

3D structure

PDB id

6OLF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AA and PE tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GAACAAUGU*ACUAUC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OLF|1|t|G|2810
6OLF|1|t|A|2811
6OLF|1|t|A|2812
6OLF|1|t|C|2813
6OLF|1|t|A|2814
6OLF|1|t|A|2815
6OLF|1|t|U|2816
6OLF|1|t|G|2817
6OLF|1|t|U|2818
*
6OLF|1|t|A|3820
6OLF|1|t|C|3821
6OLF|1|t|U|3822
6OLF|1|t|A|3823
6OLF|1|t|U|3824
6OLF|1|t|C|3825

Current chains

Chain t

28S ribosomal RNA

Nearby chains

Chain B

60S ribosomal protein L3

Chain Q

60S ribosomal protein L17

Chain e

60S ribosomal protein L31