IL_6OLF_298

3D structure

PDB id

6OLF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AA and PE tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CCGUAAC*GGAUAAGG

Length

15 nucleotides

Bulged bases

6OLF|1|t|U|2859

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OLF|1|t|C|2845
6OLF|1|t|C|2846
6OLF|1|t|G|2847
6OLF|1|t|U|2848
6OLF|1|t|A|2849
6OLF|1|t|A|2850
6OLF|1|t|C|2851
*
6OLF|1|t|G|2856
6OLF|1|t|G|2857
6OLF|1|t|A|2858
6OLF|1|t|U|2859
6OLF|1|t|A|2860
6OLF|1|t|A|2861
6OLF|1|t|G|2862
6OLF|1|t|G|2863

Current chains

Chain t

28S ribosomal RNA

Nearby chains

Chain S

60S ribosomal protein L19

Chain S2

Small subunit ribosomal RNA; SSU rRNA

Chain o

60S ribosomal protein L41

Chain q

60S ribosomal protein L37a