IL_6OLF_305
3D structure
- PDB id
- 6OLF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AA and PE tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GGCCUCGGAUAGCCGGUC*GGGUCCGGUGCGGAGUGC
- Length
- 36 nucleotides
- Bulged bases
- 6OLF|1|t|C|4718, 6OLF|1|t|C|4719, 6OLF|1|t|U|4725, 6OLF|1|t|U|4827, 6OLF|1|t|G|4828, 6OLF|1|t|G|4830, 6OLF|1|t|G|4833
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6OLF|1|t|G|4716
6OLF|1|t|G|4717
6OLF|1|t|C|4718
6OLF|1|t|C|4719
6OLF|1|t|U|4720
6OLF|1|t|C|4721
6OLF|1|t|G|4722
6OLF|1|t|G|4723
6OLF|1|t|A|4724
6OLF|1|t|U|4725
6OLF|1|t|A|4726
6OLF|1|t|G|4727
6OLF|1|t|C|4728
6OLF|1|t|C|4729
6OLF|1|t|G|4730
6OLF|1|t|G|4731
6OLF|1|t|U|4732
6OLF|1|t|C|4733
*
6OLF|1|t|G|4819
6OLF|1|t|G|4820
6OLF|1|t|G|4821
6OLF|1|t|U|4822
6OLF|1|t|C|4823
6OLF|1|t|C|4824
6OLF|1|t|G|4825
6OLF|1|t|G|4826
6OLF|1|t|U|4827
6OLF|1|t|G|4828
6OLF|1|t|C|4829
6OLF|1|t|G|4830
6OLF|1|t|G|4831
6OLF|1|t|A|4832
6OLF|1|t|G|4833
6OLF|1|t|U|4834
6OLF|1|t|G|4835
6OLF|1|t|C|4836
Current chains
- Chain t
- 28S ribosomal RNA
Nearby chains
- Chain G
- 60S ribosomal protein L6
- Chain J
- 60S ribosomal protein L9
- Chain N
- 60S ribosomal protein L14
- Chain P
- 60S ribosomal protein L13a
- Chain T
- 60S ribosomal protein L18a
- Chain g
- 60S ribosomal protein L35a
Coloring options: