IL_6OLF_307

3D structure

PDB id

6OLF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AA and PE tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CUC*GAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6OLF_307 not in the Motif Atlas

Homologous match to IL_4V90_066

Geometric discrepancy: 0.2493

The information below is about IL_4V90_066

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OLF|1|u|C|11
6OLF|1|u|U|12
6OLF|1|u|C|13
*
6OLF|1|u|G|22
6OLF|1|u|A|23
6OLF|1|u|G|24

Current chains

Chain u

PE tRNA

Nearby chains

Chain t

Large subunit ribosomal RNA; LSU rRNA