IL_6OLG_205
3D structure
- PDB id
- 6OLG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex stalled by a drug-like small molecule (CDH1_RNC with PP tRNA)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- AGGGCAAG*CU
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6OLG_205 not in the Motif Atlas
- Geometric match to IL_4V88_413
- Geometric discrepancy: 0.1461
- The information below is about IL_4V88_413
- Detailed Annotation
- SSU/LSU pseudoknot
- Broad Annotation
- No text annotation
- Motif group
- IL_41203.1
- Basepair signature
- cWW-L-cWW-L-L-R-cSH
- Number of instances in this motif group
- 10
Unit IDs
6OLG|1|B1|A|599
6OLG|1|B1|G|600
6OLG|1|B1|G|601
6OLG|1|B1|G|602
6OLG|1|B1|C|603
6OLG|1|B1|A|604
6OLG|1|B1|A|605
6OLG|1|B1|G|606
*
6OLG|1|B1|C|636
6OLG|1|B1|U|637
Current chains
- Chain B1
- 18S ribosomal RNA
Nearby chains
- Chain BC
- 40S ribosomal protein S2
- Chain BJ
- 40S ribosomal protein S9
- Chain Be
- 40S ribosomal protein S30
- Chain Bx
- mRNA
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