IL_6OLI_149
3D structure
- PDB id
- 6OLI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of human ribosome nascent chain complex selectively stalled by a drug-like small molecule (USO1-RNC)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- GGAUC*GGGCAC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6OLI_149 not in the Motif Atlas
- Geometric match to IL_4V9F_018
- Geometric discrepancy: 0.3037
- The information below is about IL_4V9F_018
- Detailed Annotation
- Triple sheared related
- Broad Annotation
- Triple sheared
- Motif group
- IL_67427.1
- Basepair signature
- cWW-cWW-L-R-L-R-cWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
6OLI|1|t|G|1408
6OLI|1|t|G|1409
6OLI|1|t|A|1410
6OLI|1|t|U|1411
6OLI|1|t|C|1412
*
6OLI|1|t|G|1437
6OLI|1|t|G|1438
6OLI|1|t|G|1439
6OLI|1|t|C|1440
6OLI|1|t|A|1441
6OLI|1|t|C|1442
Current chains
- Chain t
- 28S ribosomal RNA
Nearby chains
- Chain R
- 60S ribosomal protein L18
- Chain c
- 60S ribosomal protein L29
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