IL_6OLI_213
3D structure
- PDB id
- 6OLI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of human ribosome nascent chain complex selectively stalled by a drug-like small molecule (USO1-RNC)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- UCAAAGU*AAUGAAG
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6OLI_213 not in the Motif Atlas
- Homologous match to IL_5TBW_088
- Geometric discrepancy: 0.1873
- The information below is about IL_5TBW_088
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_36973.8
- Basepair signature
- cWW-tSH-L-R-L-R-L-R-cWW-cWW
- Number of instances in this motif group
- 3
Unit IDs
6OLI|1|t|U|3686
6OLI|1|t|C|3687
6OLI|1|t|A|3688
6OLI|1|t|A|3689
6OLI|1|t|A|3690
6OLI|1|t|G|3691
6OLI|1|t|U|3692
*
6OLI|1|t|A|3703
6OLI|1|t|A|3704
6OLI|1|t|U|3705
6OLI|1|t|G|3706
6OLI|1|t|A|3707
6OLI|1|t|A|3708
6OLI|1|t|G|3709
Current chains
- Chain t
- 28S ribosomal RNA
Nearby chains
- Chain A
- 60S ribosomal protein L8
- Chain j
- 60S ribosomal protein L36
- Chain p
- 60S ribosomal protein L36a
- Chain v
- Transfer RNA; tRNA
Coloring options: