IL_6OLZ_003

3D structure

PDB id

6OLZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GAC*GCC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6OLZ_003 not in the Motif Atlas

Geometric match to IL_3ICQ_003

Geometric discrepancy: 0.1294

The information below is about IL_3ICQ_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_70707.3

Basepair signature

cWW-cHW-cWW

Number of instances in this motif group

70

Unit IDs

6OLZ|1|A2|G|16
6OLZ|1|A2|A|17
6OLZ|1|A2|C|18
*
6OLZ|1|A3|G|139
6OLZ|1|A3|C|140
6OLZ|1|A3|C|141

Current chains

Chain A2

28S ribosomal RNA

Chain A3

5.8S ribosomal RNA

Nearby chains

Chain AN

60S ribosomal protein L15

Chain AX

60S ribosomal protein L23a

Chain Ah

60S ribosomal protein L35

Chain Aj

60S ribosomal protein L37