IL_6OLZ_035

3D structure

PDB id

6OLZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CCC*GGUCG

Length

8 nucleotides

Bulged bases

6OLZ|1|A2|U|633

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6OLZ_035 not in the Motif Atlas

Geometric match to IL_6M0X_001

Geometric discrepancy: 0.3826

The information below is about IL_6M0X_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_70784.1

Basepair signature

cWW-cWW-cSH-cWW-L

Number of instances in this motif group

7

Unit IDs

6OLZ|1|A2|C|514
6OLZ|1|A2|C|515
6OLZ|1|A2|C|516
*
6OLZ|1|A2|G|631
6OLZ|1|A2|G|632
6OLZ|1|A2|U|633
6OLZ|1|A2|C|634
6OLZ|1|A2|G|635

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain AL

60S ribosomal protein L13