IL_6OLZ_060
3D structure
- PDB id
- 6OLZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GAAAG*CUAGUAGC
- Length
- 13 nucleotides
- Bulged bases
- 6OLZ|1|A2|A|1632, 6OLZ|1|A2|G|1636
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6OLZ_060 not in the Motif Atlas
- Homologous match to IL_8C3A_030
- Geometric discrepancy: 0.148
- The information below is about IL_8C3A_030
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_17470.7
- Basepair signature
- cWW-tWW-L-R-tWH-L-cWW
- Number of instances in this motif group
- 7
Unit IDs
6OLZ|1|A2|G|1504
6OLZ|1|A2|A|1505
6OLZ|1|A2|A|1506
6OLZ|1|A2|A|1507
6OLZ|1|A2|G|1508
*
6OLZ|1|A2|C|1630
6OLZ|1|A2|U|1631
6OLZ|1|A2|A|1632
6OLZ|1|A2|G|1633
6OLZ|1|A2|U|1634
6OLZ|1|A2|A|1635
6OLZ|1|A2|G|1636
6OLZ|1|A2|C|1637
Current chains
- Chain A2
- 28S ribosomal RNA
Nearby chains
- Chain AC
- 60S ribosomal protein L4
- Chain AL
- 60S ribosomal protein L13
- Chain AN
- 60S ribosomal protein L15
- Chain Aa
- 60S ribosomal protein L27a
- Chain Aj
- 60S ribosomal protein L37
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