IL_6OLZ_147

3D structure

PDB id

6OLZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CCAU*AGGCG

Length

9 nucleotides

Bulged bases

6OLZ|1|A2|C|4682

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6OLZ_147 not in the Motif Atlas

Homologous match to IL_5TBW_114

Geometric discrepancy: 0.3969

The information below is about IL_5TBW_114

Detailed Annotation

Double sheared

Broad Annotation

Double sheared

Motif group

IL_09705.12

Basepair signature

cWW-tSH-tHS-cWW

Number of instances in this motif group

35

Unit IDs

6OLZ|1|A2|C|4544
6OLZ|1|A2|C|4545
6OLZ|1|A2|A|4546
6OLZ|1|A2|U|4547
*
6OLZ|1|A2|A|4679
6OLZ|1|A2|G|4680
6OLZ|1|A2|G|4681
6OLZ|1|A2|C|4682
6OLZ|1|A2|G|4683

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain AB

60S ribosomal protein L3

Chain AO

60S ribosomal protein L13a