IL_6OLZ_151

3D structure

PDB id

6OLZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

UGUAUG*CGAAG

Length

11 nucleotides

Bulged bases

6OLZ|1|A2|U|4596, 6OLZ|1|A2|U|4598

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6OLZ_151 not in the Motif Atlas

Homologous match to IL_5TBW_118

Geometric discrepancy: 0.2863

The information below is about IL_5TBW_118

Detailed Annotation

UAA/GAN related

Broad Annotation

UAA/GAN related

Motif group

IL_17136.4

Basepair signature

cWW-R-L-tHS-tHW-cWW

Number of instances in this motif group

18

Unit IDs

6OLZ|1|A2|U|4594
6OLZ|1|A2|G|4595
6OLZ|1|A2|U|4596
6OLZ|1|A2|A|4597
6OLZ|1|A2|U|4598
6OLZ|1|A2|G|4599
*
6OLZ|1|A2|C|4624
6OLZ|1|A2|G|4625
6OLZ|1|A2|A|4626
6OLZ|1|A2|A|4627
6OLZ|1|A2|G|4628

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain AB

60S ribosomal protein L3

Chain AW

60S ribosomal protein L24

Chain Ad

60S ribosomal protein L31