IL_6OLZ_158
3D structure
- PDB id
- 6OLZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GUCCUG*CGUCAC
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6OLZ_158 not in the Motif Atlas
- Geometric match to IL_5TBW_476
- Geometric discrepancy: 0.3928
- The information below is about IL_5TBW_476
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_31007.1
- Basepair signature
- cWW-L-R-L-R-L-R-L-R-cWW
- Number of instances in this motif group
- 5
Unit IDs
6OLZ|1|A2|G|4842
6OLZ|1|A2|U|4843
6OLZ|1|A2|C|4844
6OLZ|1|A2|C|4845
6OLZ|1|A2|U|4846
6OLZ|1|A2|G|4847
*
6OLZ|1|A2|C|4888
6OLZ|1|A2|G|4889
6OLZ|1|A2|U|4890
6OLZ|1|A2|C|4891
6OLZ|1|A2|A|4892
6OLZ|1|A2|C|4893
Current chains
- Chain A2
- 28S ribosomal RNA
Nearby chains
- Chain AE
- 60S ribosomal protein L6
- Chain AM
- 60S ribosomal protein L14
- Chain AO
- 60S ribosomal protein L13a
- Chain Af
- 60S ribosomal protein L35a
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