IL_6OLZ_204

3D structure

PDB id

6OLZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GUUAAAA*UC

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6OLZ_204 not in the Motif Atlas

Geometric match to IL_6CZR_134

Geometric discrepancy: 0.1706

The information below is about IL_6CZR_134

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_38186.5

Basepair signature

cWW-L-cWW-L-L-R

Number of instances in this motif group

5

Unit IDs

6OLZ|1|B1|G|665
6OLZ|1|B1|U|666
6OLZ|1|B1|U|667
6OLZ|1|B1|A|668
6OLZ|1|B1|A|669
6OLZ|1|B1|A|670
6OLZ|1|B1|A|671
*
6OLZ|1|B1|U|1161
6OLZ|1|B1|C|1162

Current chains

Chain B1

18S ribosomal RNA

Nearby chains

Chain BX

40S ribosomal protein S23

Chain Ba

40S ribosomal protein S26