IL_6OLZ_221
3D structure
- PDB id
- 6OLZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- CGAUGC*GGGCAG
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6OLZ_221 not in the Motif Atlas
- Geometric match to IL_1L9A_008
- Geometric discrepancy: 0.3998
- The information below is about IL_1L9A_008
- Detailed Annotation
- tSH-tHW-tHS-cWW
- Broad Annotation
- No text annotation
- Motif group
- IL_71294.3
- Basepair signature
- cWW-L-R-L-R-L-R-L-R-cWW
- Number of instances in this motif group
- 2
Unit IDs
6OLZ|1|B1|C|1098
6OLZ|1|B1|G|1099
6OLZ|1|B1|A|1100
6OLZ|1|B1|U|1101
6OLZ|1|B1|G|1102
6OLZ|1|B1|C|1103
*
6OLZ|1|B1|G|1129
6OLZ|1|B1|G|1130
6OLZ|1|B1|G|1131
6OLZ|1|B1|C|1132
6OLZ|1|B1|A|1133
6OLZ|1|B1|G|1134
Current chains
- Chain B1
- 18S ribosomal RNA
Nearby chains
- Chain BA
- 40S ribosomal protein SA
- Chain BB
- 40S ribosomal protein S3a
- Chain BN
- 40S ribosomal protein S13
- Chain BR
- 40S ribosomal protein S17
- Chain Ba
- 40S ribosomal protein S26
- Chain Bb
- 40S ribosomal protein S27
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